Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
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MligTC455_10489 | Mlig455_007844 | 0.4 | Irradiation Int S/G2/M Germline |
Mlig455_007844 {REF} {Length: 2942} {RNA1509_23232, RNA1509_37544, RNA1509_40152} {RNA1310_2784.1, RNA1509_23232, RNA1509_37544, RNA1509_40152} {RNA1509_23232, RNA1509_37544, RNA1509_40152, RNA815_6667} | ||
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MligTC455_30851 | Mlig455_019558, Mlig455_019344 | 0.4 | Irradiation |
Mlig455_019558 {REF} {Length: 6876} {Pfam: Receptor family ligand binding region [PF01094.30, score=62.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=28.0]} {Smed: dd_Smed_v6_26870_0_1, dd_Smed_v6_26870_0_1, [Score=67.4, Expect=3e-12]} {RNA1509_10728} {RNA1310_36982} {RNA815_21318} Mlig455_019344 {REF} {Length: 3905} {Pfam: Receptor family ligand binding region [PF01094.30, score=46.0]; Iron-containing alcohol dehydrogenase [PF13685.8, score=18.5]} {Smed: dd_Smed_v6_33317_0_2, dd_Smed_v6_33317_0_2, [Score=66.2, Expect=5e-13]} {RNA1509_10728} {RNA1310_123} {RNA815_8415.1} |
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MligTC455_10469 | Mlig455_056511 | 0.4 | Irradiation |
Mlig455_056511 {REF} {Length: 877} {TRANSSPLICED} {RNA1509_25942} {RNA1310_31639} {RNA815_58313} | ||
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MligTC455_18703 | Mlig455_001308, Mlig455_001146 | 0.4 | Irradiation Int S/G2/M Germline |
Mlig455_001308 {REF} {Length: 1285} {Pfam: LIM domain [PF00412.24, score=68.3]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [Score=61.2, Expect=3e-10]} {RNA1509_11447} {RNA1310_28510, RNA1509_11447} {RNA1509_11447, RNA815_38402} Mlig455_001146 {REF} {Length: 1282} {Pfam: LIM domain [PF00412.24, score=69.1]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [Score=59.7, Expect=8e-10]} {RNA1509_11447} {RNA1310_28510} {RNA815_38402} |
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MligTC455_24457 | Mlig455_062455 | 0.4 | Irradiation Int S/G2/M Germline |
Mlig455_062455 {REF} {Length: 2941} {RNA1509_34362} {RNA1310_23548, RNA1509_34362} {RNA1509_34362, RNA815_9843} | ||
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MligTC455_31187 | Mlig455_030234, Mlig455_003285 | 0.4 | Irradiation |
FAM57A | Mlig455_030234 {REF} {Length: 724} {NoTransDecoderORF} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1} Mlig455_003285 {REF} {Length: 5647} {TRANSSPLICED} {tRNA: Lys(TTT), score=88.9} {Pfam: TLC domain [PF03798.18, score=91.3]} {Human: ENSG00000167695, FAM57A, family with sequence similarity 57 member A, [Score=100, Expect=8e-25]} {Mouse: ENSMUSG00000069808, Fam57a, family with sequence similarity 57, member A, [Score=114, Expect=4e-30]} {RNA1509_29800} {RNA1310_23795.1} {RNA815_13618.1} |
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MligTC455_07794 | Mlig455_068839, Mlig455_028377, Mlig455_028380 | 0.4 | Irradiation |
Neural (non-ciliated); Xins | Mlig455_068839 {REF} {Length: 1819} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [Score=68.9, Expect=1e-13]} {RNA1509_19070} {RNA1310_34363} {RNA815_15839} {SMEDTYPE: Neural (non-ciliated) [dd_Smed_v6_14508_0_1, NA]} {SMEDTYPE: Xins [raj_facs_types]} Mlig455_028377 {REF} {Length: 1201} {TRANSSPLICED} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [Score=65.5, Expect=3e-12]} {RNA1509_19070} {RNA1310_26251} {RNA815_28987} {SMEDTYPE: Neural (non-ciliated) [dd_Smed_v6_14508_0_1, NA]} {SMEDTYPE: Xins [raj_facs_types]} Mlig455_028380 {REF} {Length: 1062} {NoTransDecoderORF} {RNA1509_19070} {RNA1310_32802} {RNA815_15839} |
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MligTC455_17344 | Mlig455_058885 | 0.39 | Irradiation Int S/G2/M |
Mlig455_058885 {REF} {Length: 1824} {RNA1509_5648} {RNA1310_13862} {RNA815_10301} | ||
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MligTC455_13978 | Mlig455_030583, Mlig455_024787, Mlig455_007531 | 0.39 | Irradiation Int S/G2/M Germline |
Mlig455_030583 {REF} {Length: 3481} {RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1310_9161.1, RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1509_32577, RNA1509_55493, RNA1509_59638, RNA815_24289} Mlig455_024787 {REF} {Length: 3379} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289} Mlig455_007531 {REF} {Length: 2595} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289} |
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MligTC455_15902 | Mlig455_057105 | 0.39 | Irradiation |
Mlig455_057105 {REF} {Length: 1146} {NoTransDecoderORF} {RNA1509_39591} {RNA1310_58977} {RNA815_30197} | ||
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MligTC455_28656 | Mlig455_054734 | 0.39 | Irradiation |
SCNN1B | Mlig455_054734 {REF} {Length: 2972} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=73.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=54.7, Expect=2e-07]} {RNA1509_47645} {RNA1310_33504} {RNA815_9471.1} | |
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MligTC455_40636 | Mlig455_069949 | 0.39 | Irradiation Int S/G2/M |
Xins; Sexual_biased | CORO1B | Mlig455_069949 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=89.7]; Type of WD40 repeat [PF16300.7, score=62.5]; WD domain, G-beta repeat [PF00400.34, score=35.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [Score=386, Expect=4e-129]; ENSG00000110880, CORO1C, coronin 1C, [Score=381, Expect=2e-127]; ENSG00000167549, CORO6, coronin 6, [Score=380, Expect=4e-127]; ENSG00000102879, CORO1A, coronin 1A, [Score=379, Expect=1e-126]} {Mouse: ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [Score=392, Expect=1e-131]; ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [Score=392, Expect=1e-131]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=385, Expect=5e-129]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [Score=381, Expect=2e-127]; ENSMUSG00000020836, Coro6, coronin 6, [Score=377, Expect=5e-126]} {Dmel: FBgn0265935, coro, [Score=398, Expect=2e-133]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=331, Expect=4e-108]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=417, Expect=5e-141]} {RNA1509_25447} {RNA1310_10454} {RNA815_24217} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.11520.0]} |
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MligTC455_21600 | Mlig455_057687 | 0.39 | Irradiation |
REEP4 | Mlig455_057687 {REF} {Length: 3084} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=89.0]} {Human: ENSG00000168476, REEP4, receptor accessory protein 4, [RH, Score=145, Expect=5e-42]; ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=144, Expect=7e-42]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=144, Expect=5e-42]; ENSMUSG00000033589, Reep4, receptor accessory protein 4, [RH, Score=139, Expect=3e-40]; ENSMUSG00000019873, Reep3, receptor accessory protein 3, [RH, Score=138, Expect=1e-39]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=165, Expect=2e-47]} {Celegans: WBGene00020562, T19C3.4, [RH, Score=135, Expect=3e-39]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [Score=171, Expect=1e-52]} {RNA1509_35810} {RNA1310_29760, RNA1509_35810} {RNA1509_35810, RNA815_17933} | |
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MligTC455_18328 | Mlig455_046618, Mlig455_046520 | 0.39 | Irradiation |
Epidermal progenitors (late); X2; Sexual_biased | ANO7 | Mlig455_046618 {REF} {Length: 4244} {Pfam: Calcium-activated chloride channel [PF04547.14, score=440.4]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=208.7]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=619, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=620, Expect=0.0]} {Dmel: FBgn0038721, subdued, [Score=488, Expect=4e-155]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=199, Expect=9e-53]} {Smed: dd_Smed_v6_5046_0_1, dd_Smed_v6_5046_0_1, [Score=717, Expect=0.0]} {RNA1509_23807, RNA1509_8525} {RNA1310_4253.1, RNA1509_23807, RNA1509_8525} {RNA1509_23807, RNA1509_8525, RNA815_8513} {SMEDTYPE: Epidermal progenitors (late) [dd_Smed_v6_5046_0_1, anoctamin 7 (ANO7)NGEP-L]} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.232100.0]} Mlig455_046520 {REF} {Length: 3155} {Pfam: Calcium-activated chloride channel [PF04547.14, score=440.7]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=203.7]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=618, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=617, Expect=0.0]} {Dmel: FBgn0038721, subdued, [Score=476, Expect=2e-153]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=200, Expect=3e-53]} {Smed: dd_Smed_v6_5046_0_1, dd_Smed_v6_5046_0_1, [Score=711, Expect=0.0]} {RNA1509_8525} {RNA1310_4253.1} {RNA815_8513} {SMEDTYPE: Epidermal progenitors (late) [dd_Smed_v6_5046_0_1, anoctamin 7 (ANO7)NGEP-L]} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.232100.0]} |
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MligTC455_49563 | Mlig455_044595 | 0.39 | Irradiation Int S/G2/M Germline |
Mlig455_044595 {REF} {Length: 3287} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=27.3]; Spondin-like TSP1 domain [PF19028.2, score=22.7]} {Smed: dd_Smed_v6_20221_0_1, dd_Smed_v6_20221_0_1, [Score=72.0, Expect=4e-13]} {RNA1509_33920, RNA1509_43518} {RNA1310_11444, RNA1509_33920, RNA1509_43518} {RNA1509_33920, RNA1509_43518, RNA815_5322} | ||
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MligTC455_42688 | Mlig455_024732 | 0.39 | Irradiation Int S/G2/M Germline |
Mlig455_024732 {REF} {Length: 3614} {RNA1509_26684} {RNA1310_5871.1, RNA1509_26684} {RNA1509_26684, RNA815_6931} | ||
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MligTC455_24361 | Mlig455_015539 | 0.39 | Irradiation |
Mlig455_015539 {REF} {Length: 1429} {RNA1509_54838} {RNA1310_48164} {RNA815_7764} | ||
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MligTC455_18495 | Mlig455_026006 | 0.39 | Mlig455_026006 {REF} {Length: 2053} {RNA1509_11077} {RNA1310_6140.1} {RNA815_3095} | |||
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MligTC455_48822 | Mlig455_008931, Mlig455_008826 | 0.38 | Irradiation |
maintenance | TNK2 | Mlig455_008931 {REF} {Length: 3044} {Pfam: UBA-like domain [PF14555.8, score=28.7]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=70.9, Expect=6e-13]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.9, Expect=4e-13]} {RNA1310_31670} {RNA815_33665} {SMEDTYPE: maintenance [48]} Mlig455_008826 {REF} {Length: 2869} {Pfam: UBA-like domain [PF14555.8, score=27.3]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=69.7, Expect=1e-12]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.1, Expect=8e-13]} {RNA1310_31670} {RNA815_33665} {SMEDTYPE: maintenance [48]} |
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MligTC455_26859 | Mlig455_064437 | 0.38 | Irradiation |
X2; Asexual_biased | ANKRD28 | Mlig455_064437 {REF} {Length: 1706} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=85.9]; Ankyrin repeats (many copies) [PF13637.8, score=68.6]; Ankyrin repeat [PF13606.8, score=53.2]; Ankyrin repeat [PF00023.32, score=34.3]; Ankyrin repeats (many copies) [PF13857.8, score=29.8]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=57.8, Expect=3e-08]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=57.8, Expect=2e-08]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=57.8, Expect=6e-09]} {RNA1509_1895} {RNA1310_1829, RNA1509_1895} {RNA1509_1895, RNA815_705} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.245008.0]} |