>Mlig455_062112 {Length: 5197} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.5]; Integrase zinc binding domain [PF17921.3, score=51.6]; Integrase core domain [PF00665.28, score=44.3]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=300, Expect=2e-86]} {RNA1509_59441} {RNA1310_15955.1, RNA1509_59441} {RNA1509_59441, RNA815_29276}
CCAGTTTTTGAGCAATTCAAACGCTATAAAAAATGTCTGTATTGCTTTGTGTGGCACTAGAAACAATTGAAAACCGTTTC
CAAGCTAAAGTACACAGAAAAGCCGGGAGGCAGTGCTCTGCAGTGCCATATTATTTTATTTCTGCGTGCTTTTACTGCCC
TCCCTTTCGCAGTTGCGGCGCAAAGCAGTTGATCAACAAAAAAAACTGCAGCATTCGAAGTACCGAATTTGCTTCCAGAG
GCTTAGGAGCTGAATAGGAAGCAGTAGACAAATTGATACCATAGACAAATTGATACCAGAGACAAATTGATACCATAGAC
AAATTGATACCATAGACAAATTGATACCATAGACAAATTGATACCATAGACAAATTGATACCATAGACAAATTGATACCA
GAGACAAATTGATAACCAGAGACAAATTGATACCAGAGACAAATTGATACCAGAGACAAATTGATACCATAGACAAATTG
ATACCATATAGACAAATTGATACCAAAGACAATTTGATAACCAGAGACAAATTGATACCAGAGACAAATTGATACCAGAG
ACAAATTGATACCATAGGCAAATTGATACTGTAGTTCAGTGCGATGTACGAGCGTACAATATTGGCGCGCAAATATTATT
AGTCACGTGTTGCAATGTATTACGTAAGACTCACGCGCACTTACTCTTCACATATATAAATATACTTGCAGGGCAAGTCG
GCCCATTTCTAAGATTCTTCGTGCACTCGCAAACCCTCCGATTTTGTCTGAGTCACTACATGGCGTCGCGAGCAAACTAT
TGACTGATCATCACTCTCTAACCCAGCGCGGTTCCAGCCACACAAACATGGCCCAAGCTTTGCAACTCACTGCACCAGAT
GCATTTGATATCGATAGCGATCCACTCACACGAGCCCAGAGATGGAAGACTTGGGCACGGAGGTTCAATAGCTACATTCG
CGCTGCTGGCATCACAGATGCGACACAACAGCTGGAGTTGCTGGTCTACACAGCGGGAGAGAAGTTGGAAGACTTTATGG
AAGACAACAGTGTTCAAAAAGGAAAATCTACAAACGAGCTCATCCAAAAGCTACAAGAGATCTTCGACCAGAAAAACAGC
GTCGTCTTCCTCCGGTACCAATTCGAGACCTGCAGACAGGAGGAGGGGGAGTCCATCGATGCGTGGTACCATCGGCTGCG
CAAGGCCGCGGATCAATGCGAATTCGGAGAACTACGGGACTCTCTCATCAGGGACAAGGTGGTCGCCCACTACCGATCGG
AGAAGATCAGAAGGGAGCTCCTTCAGCTGAACGATATCTGTCTAGCTGACGTACTGAAGCGAATCCGAGCAAGGGAAGCT
GCGGAGCAACAGGCACAGGCCATGGAAGAAAACAGCTCAGGTGGCGCCGGCGCCATGACGACCGCGAACGTGGCAGCGCT
AGGCCCACCCCGAGCACGACCGTCGCAGCCATTCAGAAGGGATCCTGCAATGAAGGACGGTGGCATCAGCTGCGAGCGCT
GCGGACGGCCGGGTCATCGAACGTGCGAGGCTGCTAGAGACAAGGCATGTCGACGCTGCGGTAAGATTGGCCATTTCGCC
CGGGCATGTCGGGGAACGTCCAGAATACCCGTGAGAGCTGTCAACGAACCGGACGATCGCTCCTACGGGCAAGTCGAATA
TCTGCAGGACAACTCCACTGAGCACGAGCTTTTCAGCCTCCGAAATAGCGGATCAGCATGGACTCAAGCCACCGTCAACG
GATTCAAGACAACCCTGCTTATCGACAGTGGAGCGGCCTGCAACATCATCGACAGAGGCCTTCGAAAGGATGCCACAGAA
GGCCAGGCTCCAAGCAGCCAGTGATCGGGTCTATCCCTATGGAAGCCAACAGCCACTGAAGCTGCTCGGCAAGACCGACC
TACAGGTCAGCGTTTTCGGTTGCCAGGAGACGCTTCCGTTCCTGGTGCTGGACGGAAAGGGTGCTTGCATAATAGGCCGC
AGGAGCGCGGAAGACCTAGGAGTTCTGCGAGTCGGCCCGGAAGACAAGGCAGCGTGTGAGCTACGCTCGGAGTGTCCGAC
TGACAGGCTGCTAGCCGGCGTTCCAAAAGACCTTCGGCAGTCCCCAGGTGCTCCATCTTTAGACGAAATCCTCAAGGAAA
ATGCACAGGCCTTCGACGGAATCGGCTGTCTTAAGAACTACGCAGCCCGCATCTTCCTGGAAGAGGGCGCAAGACCAGTG
TGCCATCCACCATCAAGAGTGCCAATTCACCTCGCCCCAGCAGTGGACGCCGAGCTCCAGTACCTAGAAGAACAAGGCAT
CATTGAGCCAGTGGAGGGACCCTGCCCGTGGGTTTCTCGTATCGTCGTCGTCCCCAAAGAAGCTCCTGGCGAGATCAGGA
TCACTCAGGATCTGAGGGAGCTAAACAAGTCTGTCGTCAGGGAGCGACACCCAATACCGACCTTTGAGGAGGTAACAGGC
GACATGGCAGGAGCGACGCTGTTCTCAGAGTTGGACGTCGCAAAAGCATTCTATCAAATCCCTGTGTCAGAGGAGTGCCG
GCATCTTCTAACTTTTTCAACGCCTCGAGGTCTTCGGCGGCTGACGAGACTCTGCATGGGGCTATCAACGGCGCAGGAAA
TTCTTCAAGCTGTTATGTCATCCGTGCTGGCTGGACTTTCAAAAGTAAAATGGATCCACGATGACATTATTGTCTATGGC
CACAGCGTGGCGGAGCATCACAACAATCTGCGGGAGTGCCTCCAGCGGCTGGCGCAGCACGGACTGACGCTCAACCCGGC
CAAGTGCAAGCTGGCACGAACGCAAGTCACCTTCATGGGGATGCGATTGTCGAAGGACGGAGTCAGGCCAACCGAGTCAA
AGCTGGAGGCAGTTAATGCATTTGCAGAGCCAACGAATGTCACGGAGGTGCGCTCGTTCTTGGGACTTGTCAACTACCTG
GCCGCATTCACCCCGAGGCTGGCGGACCTGGCAAAGCCGCTGCGCAACCTGACAAGGAAGGGCCAGCCCTGGGCATGGGC
CGATCTGGAAAGACAAGCCTTCAGCGACATCAAGTCTCAAATCGCGTCAAGTGGCTCTCTTGCCTTTTTCAACCATCGTC
TTCCGACGCAACTCATTGTCGACGCTGGGCCAGCGGGGCTGGGTGCAATCCTGTCACAGACACAATCGGACGGAACCAGG
CGGCCCATCGCATACGCTAGCCGGACACTGTCGGACGTTGAGCAACGCTATTCCCAAACAGAGAAAGAGGCGTTGGCCGT
GAAGTTCGGCTGTTTAAAGTTTCAATTCTACCTCCACGGCGCGCCGATGTTCACGGTGCAAACCGACCACAAGCCACTGG
TTGCTCTGTTCGGCAGCAGTTCGAGACCCCCTCCGAGAATCGAAAGGATGGCATTGCGCATTCAGCATATGAAATTCACA
GTCGAGTACCAGCCGGGCCCGCTCAACCCGGCAGACGTGCTCAGCCGACAGCCACTGCCGACACCCGCACCGAATGTGGG
CGAAGAGCTGGATGCACTTTCCATCGCCGCTGTTGTACAGGCGGCCGTACCAAATGCGCTGTCACTGACCAGCGTACAGA
AGAGCTCGCAAAAGGACGCAACAATTCAAGCGGCGATTCGCGCCTTAGAGACAGGGCGGTGGAGCCTGGAGTCAGCAGAA
CTGCGGTCGCTGCATGCGCTGCGTCACGAACTGTCGGCAGTGGACGGGGTGCTCCTACGGGGCCAGCGGATCATCGTCCC
GGTGGCGCTCCGACGGCTTGTACTGGATCTAGCGCACCGGGGGCACCAGTGCACACGTAAGACGCTGGACCGGCTGAACA
CCAAGGTCTGGTGGCCAAGGATGCAACTGGAGACGGAGCGCTTCATAGCCACGTGCCGGGCCTGCCTGGCGACCTCGCAT
GCCGCTGACGTGACTGCATCACCGCTAAAGCCGACGCCCATCCCGAAGGCGGCCTGGCTGACGCTCGGGGCGGATCTGCT
AGGACCCATTCAAGGCAGCATGCTGCTAGTCTGCGTCGATCAATACTCCCGATTTCCCGAGGTGGAGGTTGTCCAGACCA
CGACGGCTGAGGCGCTAATCCCTCGACTGAGGAGTTCATTCGTCCGGTTTGGAATCCCTCAAACGTTAGTTACTGACAAC
GGCCCACCGTTCTCTTCAGCCCAGTTCAAGAGCTTCCTGGACAGCTACGGAATTCGGCAGCGCCTCATCACACCGTTACA
TCCACAGGCCAACGGCGCCACCGAGCGTTTGAATCGTTCCATCAACAAGGTGGTGCGCGCTGCGATCGCACAGAAGCGCG
ACTGGAGAGCGGCCCTTGACGAGTGGCTGCTGGCCTATCGGTGCACGCCTCAGCGAACAACTGGACGGGCGCCTGCCGAG
CTCCTCATGGGTCGCGTGCTGAACGACTCCATCCCGTCGGTCAGACCGTCGAGACCGGTGGCCATCGCAGACCGGCAGCT
TCGGCAGCGTGACGCACTTCGAAAGGCGCAAGGCAAGCTCTACACAGACCGGAAGCGATTGGCGAGACCGCACAAGCTCA
AGGTTGGCGACACAGTGCTGCGGCGGCGACTGAATCCGCTCAAGGGAGACACGCCGTTCGAGTGGGACCCCTGGCTCATC
GAGGAGATCAAGGCGGACTCGGCGACGATACGACAGGGTGCCAGAGTTTGCAGGCGGCACTGCACCGACCTAAAGCGAGT
GGCACCGGAGTCCGAGCCTGACAATCCGGGCGAGCTGCCAGCGATGCCGCAACCGGAAGTGAATGCGCCTCCGCCGCAGC
CAGCCGCAGGCGAGCGAGCGGCCTCGCCCATTGCGTTGCGGCCACATCCCCGGGCGGCGAAGGTGAACGTGAACTACAAG
GCTTGAAAAAGGTTTTTGTTAAACGGTAGCATCTGATTTTTTGTATTTTTTGCTGGACTTTTGCTAAAATTGTAACAGAA
TGAAATTTAACAAAAACAGATTTTTTAAACCCAACTTTAAAAGTTTGCTTTTAAGCCGTATTTGAGGAGAGATGTAGTGT
AGTTCAGTGCGATGTACGAGCGTACAATATTGGCGCGCAAATATTATTAGTCACGTGTTGCAATGTATTACGTAAGACTC
ACGCGCACTTACTCTTCACATATATAAATATACTTGCAGGGCAAGTCGGCCCATTTCTAAGATTCTTCGTGCACTCGC