>Mlig455_012998 {Length: 3998} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=107.9]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=50.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=45.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=29.1]; Aspartyl protease [PF13650.8, score=24.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=229, Expect=9e-62]} {RNA1509_5479} {RNA1310_294} {RNA815_755}
CCAGCCATGGCTGAGGCCTGGCTGCAAAGTTTTGAAGCACTGTGCAGGCACAAAAACTGCAAGATACAAACGAAGAGAAG
CAGGTGACAGACCTCTTCCTTGCTCGAGCAGGAATCAATGCAGTCCGATCCGTCTCTATCATGGCAAAGCCGAAAAACAT
TGAGGATATGACCTTCAAGGACATCAAGAAAATGATCATCGGGCGACTCCAGCCCAAAAAGAAACTGGTGATTGCAGAGC
GCACAAGGTTCATGTCCCAGCGGCAGCTGTCAACAGAGTCGGCCCAGCAGTTCGCGGAGCGCTTGAGAGACGCGGCAAAG
CACTGTGAGTTTGACAAGCTCAACGAAAAAGACTGCAAGCAGTCAGCCGAGGATGACTTGATCCAAACACTGCTGATCAG
CGGCTTGTGCGACCACAGCCAGCGGACTAAAACACTTGAGCACATTCAGAGCTCTGAGAATCCAGTGACTCTGGACACGT
GTCTGCAGTACATCCAGCAGTTAGAGCTCATCCAGAGCTACAGCTCAAGCGACCGATCTGCTGAAGCCCGAGAGCCTAGC
AGAAGCTCCGAGACGGCTGAGAGTTCGACACCAGTTGCCAGCATCGACAGGAACCGCAATAGCGGTGCTCAGTGCAGGTC
GTGTGGTCTGCAGCACCAGCCAGGCAAATGCCCTGCATTCGGGAAGACCTGTAACAAGTGCCACCGCAGGAACCACTTTG
CTGCAGTCTGCAGGAGCAGCGCCAAGTCCAAGTCGGTTGCACCTGCCCATGAAATCGACACGAGTGAGTGTGAGCAGGCA
GGCATCTACACCATCGTCGGCAACAAGAGCGGAAGCGGCAGCATAAAAACTGTGCTCATTGAAGGCAAGCCGTTCAAAAT
GCAGCTCGACTCTGGATCCGGTGCGAGCATCATTCCGATAAACTTCTGGAGGAGCCTCGGTGAGCCCAAGCTACGAAAGT
CCAAGCTGAGACTGCGACAATTTGACGGAACGGTCATCAGAACTAGAGGATGCTTCACGGCGCTCATCGAAGTCGGGAGA
CAAATCGCCTGTGCGGACGTGACGGTCACCGAATGCACAAAGGAGCACGGCCTCATCGGAACAGACGTGCTGGACTTCAA
GCTGGACACAGCGACTGTCAATCAAGTGGAGCGCAGCAGCAAACCGCTAGGCAAGCTCAAAGGTTTCCGTGCTCGGGTCC
TGCTCAGGGAGAACGCTCAGCCCAGCTTCTTCGATGCCCGGCCGCTCCCGATTCATCTCAAGCCGCTGGTGGTGGCTAAG
CTGCGGACGATGATCGACGCCGGGATCCTCGAGCCCGTGCCGCCAGGCGGCAGCAGTTGGGCATCGCCCATTGTGGTGGT
GCGCAAGGCCGACGGAGACCTGAGAATCTGCTCCGACTACAAGGTCGGGGTGAACCCGAAGATCTGCTCTGACGCCTACC
CACTGCCCAACATCGAGCAAGCCTTCAGTGCCCTGGCAGGCCTGCTCAGATGGACGCGCATGCCATACGGGGTGAAGACG
GCCAGTGCGCAGTTCCAGGCTGCCATGGAGGCAACGGTCGGCGGTGCGGTCAGCAACCTGGTGATCTACCAAGACGACAT
GTGCGTTGGCGCCACCACAGCGGACGAATTGGACAGCAAAGTCCGGGACCTGCTGAGAGCGCTTTCTGATGCCGGCATGT
CAATCAACGAAAAAAAGTGCGTTTTCCGCAGCACGGAAATCAGTTTCCTTGGCTACCGCATCGCGGCTGACGGCGTGCGC
CCTGATCGGAAGCTGGTGGAGAAAATCCTCGGCGTGAGCACCCCGGCGAGCAAAAAGGAACTCGAATCGTTTCTAGGAAT
GACGGTGTACTACTCGCGCTACATCAAGTCCTACTCGGAGAAGACCGAGCCGCTGACCGAGCTGCGGAGCAAGAAAGTCG
CGTTCCATTGGGGACCTCGGCAGCAGAAAGCGTTTGACGAGCTCAAGCAGGCGCTTGCAGCTTCCCCAGTGGTCCGAATC
TTCGATGCAAGAAAGCGCACAACTCTGACTACTGACGCCAGCGAGAAGGCCATAGCAGCAATCCTCTCTCAGGACGAGCA
CCCAGTGATGTACCTGTCAAGACGGCTGACACCGGCTGAGAGAAATTACTCGAATATGGAGCGAGAGGCCCTGGCTGTGG
TGTGGGCCACTCAGAGAGCCAGACACTTTCTTCTCGGCAGCAAGTTTGTGCTCCAGTGCGATCATCAACCATTGGAGTTC
ATTTTTAGTCCGTCTCGGGAGCTTCCAAAGGTCACATCGGCTAGGATCATGCGCTGGGCGTTGCAGCTGTCGGCCTTCGA
CTACGAAATCTCGTACATCAAGGGCAGCTGCATCCCGCACGTCGACGCGCTGTCTCGAATTGAATTCAAGGAGGAAGGCG
ATGGAGACGACTGCCAGGAAAGCTTCGTTCACTGGACAGAGACGGAGGTGCTCAAGCTGGAGCAGATCAGAGACGCCACT
GACAATGACCCGGTGCTCGCTAGCGTCAAGCGCAGGATCCGCAGCAATGCGTGGAACAACTGCTCGGCAGCGGAGCGACC
GTATAAAGCCGTCCGCCAGCAGCTCTCAGTGGAGAATGGCGTTGTCTGCCTGAGAGACCTGGTGGTCCCGCCTAGCCGGC
TGCGGCAAGACGTGCTGCGAGCGGCCCACGGCGACTCGCACTGCGGTGCTCTAGCGACAAGAAGTCGACTCAAGCTGGAA
GCCTGGTGGCCGGGTCACTGCGAGGACGTCGAAAACTTCGTCAAGCAATGCCAGCGATGCGCGGAGATCCGTCCAATGCC
TGCCAGAACGTGCCACACCTGGCCGGCTGAAGATGGTCCCTGGAGACGCGTGCACATGGACCATGCTCACGTTCCCGGCT
TCGGCCTGCTGCTCATTGTGGTGGACGCCTTCTCCGGCTGGCCGGAAGTGGTGCCTGTTGCCGACAAGAGCGCGACGACG
GTCATCAAGGTACTCCGCCTGATTTTCTCCCGCCTGGGTGTGCCGCATACCTTGGTGGCGGACAATGCTCCGGAGTTCCG
TGACCAGCAGCTGCACGAGTGGCTCAAGAAGATCGGCTGCTCGCCGATGCACTCGCCGCCGTATCATCCGCAGTCAAACG
GGTGCGCCGAGCGCATGGTCCAGACCGTCAAGAAGGGGCTGCGGGCCTTCGCCGTGCACCAGGGCCGGTTCGACGCGTAC
CTCGCCAAGCTGCTGCTTAACTACCGGGCCACTCCGCGGGGCGACGGGCGTGGCAGTCCATCTGCGCTTATGGGGCGACA
GCTGCGAAGTCCGCTGACCCTCCAATTCGACACCGATGCGCCGCTCGTCTACCAGTCGCGACCGGGGGGGCCGGCTGAGA
CCGTCCGCTTTGTGGTACAGGCCGGCCACAACACGGCCGTGGTCACCCGGGACAAGGGTGACAGGCCTGTGCTGGCACAC
CGGGATCAGCTGCGCTTGCGTCCGAGTCCAAGCCGGGCGGAAGTTACGGACAACACTGACGACAGCGGCCGGGACCCTGA
CGATGCCGGCCGGAGCCCTGACGACGGCGACCGGAACCCTGACGAAGGCGGCCGGAACCCTGACGAAGGCGGCCGGAACC
CGGAACCTGATAGCCAGCGGCCAGACGCAGCGGCACCACCGCAGCAGGCCGCTAAAGCTACACCGGAGCCCCGACGAAGC
TGCAGGTCGACCAAGGGGGTCGCCCCAGACCGACTGTCTCCTCGTTGGTGATGAGGGGATGTTGTATCGTGACTTGACTT
GAAGTGCGCAGTGTGGGGCTGCACCCCAATTGTTATTGGCGCTGAGTTTAGGACTGCTTGCTCTCTCCCCGCCTGCTCTG
TCTGTCAATGTACGCTTATGCCTAACCGTCTAATCTATTTGCTGATGGTTTACTCGTATCTGCATGTACATCTATGTGCA
ATGCCAACTACAATAAATAACAACCTCTCGCCCATTTGCGGCTCAAGTTTGGCTAGCCAGCCACGACACGACAGACTCT