M. lignano Neoblast Screen 2016.
Mlig455 transcriptome version. Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

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Found 1 result for *Mlig455_070531*.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC455_48076 Mlig455_070531 1.81 X2 RNF185 Mlig455_070531 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; RING-H2 zinc finger domain [PF12678.9, score=23.6]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=1e-51]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=168, Expect=7e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=2e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1310_12532.1, RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1509_12431, RNA1509_35387, RNA1509_50361, RNA815_8137.1} {SMEDTYPE: X2 [raj_facs_types]}
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