Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_21301 | Mlig455_055312, Mlig455_055218 | 2.13 | Gut; Xins | SYNCRIP; HNRNPR | Mlig455_055312 {REF} {Length: 3347} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=144.4]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.5]; RNA recognition motif [PF16367.7, score=21.9]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]} {Mouse: ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=356, Expect=2e-112]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=405, Expect=2e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=2e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=256, Expect=8e-75]} {RNA1509_41895} {RNA1310_12864} {RNA815_4749.1} {SMEDTYPE: Gut [dd_Smed_v6_2228_0_1, APOBEC1 complementation factor (A1CF)]} {SMEDTYPE: Xins [raj_facs_types]} Mlig455_055218 {REF} {Length: 3254} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=142.8]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.6]; RNA recognition motif [PF16367.7, score=22.7]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [RH, Score=373, Expect=7e-120]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [RH, Score=372, Expect=1e-119]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=358, Expect=4e-113]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=404, Expect=4e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=3e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=258, Expect=1e-75]} {RNA1509_41895, RNA1509_4811} {RNA1310_12864, RNA1509_4811} {RNA1509_4811, RNA815_4749.1} {SMEDTYPE: Gut [dd_Smed_v6_2228_0_1, APOBEC1 complementation factor (A1CF)]} {SMEDTYPE: Xins [raj_facs_types]} |