Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_37488 | Mlig455_059724, Mlig455_048727 | 0.28 | Irradiation |
Neoblast | RAD50 | Mlig455_059724 {REF} {Length: 2702} {Pfam: AAA domain [PF13476.8, score=73.2]; AAA ATPase domain [PF13175.8, score=21.6]; Designed helical repeat protein 10 domain [PF18595.3, score=21.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=18.5]} {Human: ENSG00000113522, RAD50, RAD50 double strand break repair protein, [Score=298, Expect=5e-85]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=309, Expect=9e-89]} {Dmel: FBgn0034728, rad50, [Score=176, Expect=1e-44]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [Score=122, Expect=3e-28]} {Smed: dd_Smed_v6_11475_0_2, dd_Smed_v6_11475_0_2, [Score=262, Expect=2e-73]} {RNA1509_17196} {RNA1310_1701} {RNA815_15702} Mlig455_048727 {REF} {Length: 3405} {TRANSSPLICED} {Pfam: AAA domain [PF13476.8, score=97.7]; AAA ATPase domain [PF13175.8, score=27.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=24.8]; Designed helical repeat protein 10 domain [PF18595.3, score=20.9]} {Human: ENSG00000113522, RAD50, RAD50 double strand break repair protein, [Score=339, Expect=5e-99]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [RH, Score=346, Expect=2e-101]} {Dmel: FBgn0034728, rad50, [Score=201, Expect=1e-52]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [Score=142, Expect=4e-34]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [RH, Score=311, Expect=1e-89]} {RNA1509_17196} {RNA1310_1701} {RNA815_15702} {SMEDTYPE: Neoblast [dd_Smed_v6_11475_0_1, rad50-like protein]} |