M. lignano Neoblast Screen 2016.
Mlig455 transcriptome version. Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

Text search

search Exact search

Found 1 result for *Mlig455_044943*.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC455_53559 Mlig455_044943 2.36 Parapharyngeal; Sexual_biased ARHGEF16 Mlig455_044943 {REF} {Length: 4573} {Pfam: RhoGEF domain [PF00621.22, score=104.2]; SH3 domain [PF00018.30, score=30.4]; Variant SH3 domain [PF07653.19, score=27.2]; Variant SH3 domain [PF14604.8, score=25.1]} {Human: ENSG00000130762, ARHGEF16, Rho guanine nucleotide exchange factor 16, [RH, Score=236, Expect=4e-67]; ENSG00000066248, NGEF, neuronal guanine nucleotide exchange factor, [RH, Score=229, Expect=2e-65]; ENSG00000277101, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=227, Expect=5e-63]; ENSG00000114790, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=227, Expect=5e-63]} {Mouse: ENSMUSG00000026259, Ngef, neuronal guanine nucleotide exchange factor, [RH, Score=233, Expect=3e-66]; ENSMUSG00000036885, Arhgef26, Rho guanine nucleotide exchange factor (GEF) 26, [RH, Score=223, Expect=8e-62]} {Dmel: FBgn0261547, Exn, Ephexin, [Score=193, Expect=3e-51]} {Celegans: WBGene00019487, ephx-1, EPHeXin (Eph-interacting GEF) homolog, [RH, Score=247, Expect=2e-69]} {Smed: dd_Smed_v6_12864_0_1, dd_Smed_v6_12864_0_1, [Score=170, Expect=3e-44]} {RNA1509_29536, RNA1509_39142, RNA1509_56108} {RNA1310_6037.2, RNA1509_39142, RNA1509_56108} {RNA1509_39142, RNA1509_56108, RNA815_3320.1} {SMEDTYPE: Parapharyngeal [dd_Smed_v6_12864_0_1, neuronal guanine nucleotide exchange factor (NGEF)]} {SMEDTYPE: Sexual_biased [CUFF.674470.0]}
Berezikov Lab - 2016-2021 © ERIBA