Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_29864 | Mlig455_047882, Mlig455_043454 | -1.01 | X1 | NYNRIN | Mlig455_047882 {REF} {Length: 3563} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.3]; Integrase zinc binding domain [PF17921.3, score=54.6]; Integrase core domain [PF00665.28, score=51.0]; H2C2 zinc finger [PF09337.12, score=26.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=21.9]; Aspartyl protease [PF13650.8, score=20.8]; Domain of unknown function (DUF4537) [PF15057.8, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=54.7, Expect=1e-06]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=6e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=6e-18]} {Celegans: WBGene00019335, K02F6.1, [Score=50.8, Expect=7e-06]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=327, Expect=9e-95]} {RNA1509_51271} {RNA1310_6932} {RNA815_14765} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_043454 {REF} {Length: 3563} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.3]; Integrase zinc binding domain [PF17921.3, score=54.6]; Integrase core domain [PF00665.28, score=50.6]; H2C2 zinc finger [PF09337.12, score=26.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Aspartyl protease [PF13650.8, score=20.8]; Domain of unknown function (DUF4537) [PF15057.8, score=18.9]; Integrase core domain [PF13683.8, score=18.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.9, Expect=2e-06]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=6e-18]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=6e-18]} {Celegans: WBGene00019335, K02F6.1, [Score=50.4, Expect=7e-06]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=322, Expect=3e-93]} {RNA1509_51271} {RNA1310_6932} {RNA815_14765} {SMEDTYPE: X1 [raj_facs_types]} |