Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_28187 | Mlig455_042569, Mlig455_060476, Mlig455_028755, Mlig455_063991 | 2.2 | Neoblast; Sexual_biased | PIF1 | Mlig455_042569 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=95.8]} {RNA1509_51272, RNA1509_7957} {RNA1310_363, RNA1509_7957} {RNA1509_7957, RNA815_104.1} Mlig455_060476 {REF} {Length: 6666} {Pfam: PIF1-like helicase [PF05970.16, score=125.9]; AAA domain [PF13604.8, score=57.0]; AAA domain [PF13245.8, score=31.0]; Helicase [PF02689.16, score=16.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=124, Expect=9e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=119, Expect=3e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=121, Expect=5e-29]} {RNA1509_11156, RNA1509_16132} {RNA1310_143.1, RNA1509_11156} {RNA1509_11156, RNA815_104.1} {SMEDTYPE: Neoblast [dd_Smed_v6_16842_0_1, PIF1 5'-to-3' DNA helicase (PIF1)]} {SMEDTYPE: Sexual_biased [CUFF.116654.0]} Mlig455_028755 {REF} {Length: 11371} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=2e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_46} {RNA1310_143.1} {RNA815_104.1} {SMEDTYPE: Neoblast [dd_Smed_v6_16842_0_1, PIF1 5'-to-3' DNA helicase (PIF1)]} {SMEDTYPE: Sexual_biased [CUFF.116654.0]} Mlig455_063991 {REF} {Length: 11135} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=2e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_46} {RNA1310_143.1} {RNA815_104.1} {SMEDTYPE: Neoblast [dd_Smed_v6_16842_0_1, PIF1 5'-to-3' DNA helicase (PIF1)]} {SMEDTYPE: Sexual_biased [CUFF.116654.0]} |