Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_38319 | Mlig455_061508, Mlig455_028523 | 2.64 | Irradiation Int S/G2/M S/G2/M, no gonads Neoblast Neoblast, stringent |
X1; Asexual_biased | HMGB1 | Mlig455_061508 {REF} {Length: 224} {NoTransDecoderORF} {RNA1509_51801} {RNA1310_47956} {RNA815_8157} Mlig455_028523 {REF} {Length: 4694} {Pfam: HMG (high mobility group) box [PF00505.21, score=130.7]; HMG-box domain [PF09011.12, score=110.0]} {Human: ENSG00000189403, HMGB1, high mobility group box 1, [Score=167, Expect=8e-52]; ENSG00000164104, HMGB2, high mobility group box 2, [Score=161, Expect=1e-49]} {Mouse: ENSMUSG00000066551, Hmgb1, high mobility group box 1, [RH, Score=162, Expect=1e-50]} {Dmel: FBgn0278608, Dsp1, Dorsal switch protein 1, [Score=187, Expect=3e-58]} {Celegans: WBGene00001972, hmg-1.2, High mobility group protein 1.2, [Score=147, Expect=2e-44]} {Smed: dd_Smed_v6_1331_0_1, dd_Smed_v6_1331_0_1, [RH, Score=237, Expect=5e-79]} {RNA1509_561} {RNA1310_15889.1, RNA1509_561} {RNA1509_561, RNA815_4632} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.516811.0]} |