Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_21604 | Mlig455_062261, Mlig455_025880 | 1.76 | X1; Asexual_biased | HCFC1 | Mlig455_062261 {REF} {Length: 4851} {Pfam: Kelch motif [PF13854.8, score=102.1]; Galactose oxidase, central domain [PF13418.8, score=95.2]; Kelch motif [PF01344.27, score=80.6]; Galactose oxidase, central domain [PF13415.8, score=77.1]; Kelch motif [PF13964.8, score=71.3]; Kelch motif [PF07646.17, score=44.7]; Fibronectin type III domain [PF00041.23, score=32.8]} {Human: ENSG00000172534, HCFC1, host cell factor C1, [RH, Score=531, Expect=1e-164]} {Mouse: ENSMUSG00000031386, Hcfc1, host cell factor C1, [RH, Score=529, Expect=3e-164]} {Dmel: FBgn0039904, Hcf, Host cell factor, [RH, Score=479, Expect=5e-149]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [RH, Score=392, Expect=4e-123]} {Smed: dd_Smed_v6_6196_0_1, dd_Smed_v6_6196_0_1, [RH, Score=474, Expect=2e-151]} {RNA1509_19051} {RNA1310_1686.1, RNA1509_19051} {RNA1509_19051, RNA815_4530} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.35417.1]} Mlig455_025880 {REF} {Length: 4784} {Pfam: Kelch motif [PF13854.8, score=102.0]; Galactose oxidase, central domain [PF13418.8, score=95.2]; Kelch motif [PF01344.27, score=80.4]; Galactose oxidase, central domain [PF13415.8, score=77.1]; Kelch motif [PF13964.8, score=71.3]; Kelch motif [PF07646.17, score=44.7]; Fibronectin type III domain [PF00041.23, score=32.8]} {Human: ENSG00000172534, HCFC1, host cell factor C1, [RH, Score=530, Expect=2e-164]} {Mouse: ENSMUSG00000031386, Hcfc1, host cell factor C1, [RH, Score=528, Expect=6e-164]} {Dmel: FBgn0039904, Hcf, Host cell factor, [RH, Score=479, Expect=7e-149]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [RH, Score=394, Expect=1e-123]} {Smed: dd_Smed_v6_6196_0_1, dd_Smed_v6_6196_0_1, [RH, Score=474, Expect=3e-151]} {RNA1509_45778, RNA1509_8904} {RNA1310_1686.1, RNA1509_45778, RNA1509_8904} {RNA1509_45778, RNA1509_8904, RNA815_4530} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.35417.1]} |