Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_45053 | Mlig455_017042, Mlig455_016954 | 2.22 | Xins; Asexual_biased | COL24A1 | Mlig455_017042 {REF} {Length: 4695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=485.2]; Fibrillar collagen C-terminal domain [PF01410.20, score=78.1]; von Willebrand factor type C domain [PF00093.20, score=19.0]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=371, Expect=5e-105]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=416, Expect=2e-122]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=366, Expect=1e-103]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=308, Expect=5e-85]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=479, Expect=5e-144]} {RNA1509_4110} {RNA1310_2861} {RNA815_3994} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.91059.0]} Mlig455_016954 {REF} {Length: 4803} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=483.8]; Fibrillar collagen C-terminal domain [PF01410.20, score=78.1]; von Willebrand factor type C domain [PF00093.20, score=19.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=370, Expect=1e-104]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=414, Expect=2e-121]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=362, Expect=3e-102]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=298, Expect=4e-82]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=492, Expect=2e-148]} {RNA1509_4110} {RNA1310_2861} {RNA815_3994} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.91059.0]} |