Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
|
MligTC455_29405 | Mlig455_033933, Mlig455_054282, Mlig455_014617, Mlig455_043863, Mlig455_022481, Mlig455_020640, Mlig455_016197, Mlig455_022482, Mlig455_012697, Mlig455_059379 | 0.11 | Irradiation |
X1 | Mlig455_033933 {REF} {Length: 593} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_054282 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_19647} {RNA815_63252} Mlig455_014617 {REF} {Length: 191} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_23205} Mlig455_043863 {REF} {Length: 1710} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=24.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=69.3, Expect=1e-13]} {RNA1509_54660} {RNA1310_8339} {RNA815_14127} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_022481 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_020640 {REF} {Length: 2026} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339, RNA1509_54660} {RNA1509_54660, RNA815_14127} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_016197 {REF} {Length: 786} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_8339} {RNA815_63252} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_022482 {REF} {Length: 301} {NoTransDecoderORF} {RNA1509_54660} {RNA1310_44007} {RNA815_63252} Mlig455_012697 {REF} {Length: 490} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.0]; GIY-YIG catalytic domain [PF01541.26, score=21.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=153, Expect=3e-41]} {RNA1509_54660} {RNA1310_22205} {RNA815_63252} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_059379 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_34250} {RNA1310_63459} {RNA815_23205} |