M. lignano Neoblast Screen 2016.
Mlig455 transcriptome version. Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

Text search

search Exact search

Found 1 result for *Mlig455_008530*.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC455_41422 Mlig455_008530 0.77 Sexual_biased BBS4 Mlig455_008530 {REF} {Length: 2865} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=131.8]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=66.5]; Tetratricopeptide repeat [PF13371.8, score=62.3]; Tetratricopeptide repeat [PF13432.8, score=60.0]; Tetratricopeptide repeat [PF13428.8, score=59.6]; Tetratricopeptide repeat [PF13424.8, score=57.6]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.5]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=39.9]; Tetratricopeptide repeat [PF14561.8, score=25.0]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Tetratricopeptide repeat [PF13429.8, score=22.0]; Protein kinase G tetratricopeptide repeat [PF16918.7, score=21.4]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.5]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=498, Expect=6e-172]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=491, Expect=3e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=253, Expect=4e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=206, Expect=5e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=445, Expect=6e-152]} {RNA1509_10669} {RNA1310_19623.1} {RNA815_1541.1} {SMEDTYPE: Sexual_biased [CUFF.281938.0]}
Berezikov Lab - 2016-2021 © ERIBA